The sepiapterin reductase gene region reveals association in the PARK3 locus: analysis of familial and sporadic Parkinson's disease in European populations
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vor 18 Jahren
Background: Parkinson's disease is a genetically complex disease
with mixed mode of inheritance. Recently, a haplotype across the
sepiapterin reductase (SPR) gene, which is located in the PARK3
linkage region, was shown to modulate age of onset of Parkinson's
disease in sibships from North America.Objective: To make a
thorough assessment of the SPR gene region in sporadic Parkinson's
disease.Methods: A linkage study in 122 European sibship families
with five microsatellite and 17 single nucleotide polymorphism
(SNP) markers in and around the SPR gene region, and an association
analysis in 340 sporadic cases of Parkinson's disease and 680
control subjects from Germany with 40 SNPs. Linkage was evaluated
by non-parametric linkage scores and genotypic or haplotype
association was tested by regression analysis, assuming different
risk effect models.Results: Significant LOD scores between 2 and 3
were obtained at the two SPR-flanking markers D2S2110 and D2S1394
and seven SNP markers around the SPR gene. We found the previously
reported promoter SNP rs1876487 also significantly associated with
age of onset in our sib pair families (p-value 0.02). One strong
linkage disequilibrium (LD) block of 45 kb including the entire SPR
gene was observed. Within this LD block all 14 inter-correlated
SNPs were significantly associated with Parkinson's disease
affection status (p-value 0.004).Conclusions: DNA polymorphisms in
a highly intercorrelated LD block, which includes the SPR gene,
appear to be associated with both sporadic and familial Parkinson's
disease. This confirms a previous study showing that SPR
potentially modulates the onset of or risk for Parkinson's disease.
with mixed mode of inheritance. Recently, a haplotype across the
sepiapterin reductase (SPR) gene, which is located in the PARK3
linkage region, was shown to modulate age of onset of Parkinson's
disease in sibships from North America.Objective: To make a
thorough assessment of the SPR gene region in sporadic Parkinson's
disease.Methods: A linkage study in 122 European sibship families
with five microsatellite and 17 single nucleotide polymorphism
(SNP) markers in and around the SPR gene region, and an association
analysis in 340 sporadic cases of Parkinson's disease and 680
control subjects from Germany with 40 SNPs. Linkage was evaluated
by non-parametric linkage scores and genotypic or haplotype
association was tested by regression analysis, assuming different
risk effect models.Results: Significant LOD scores between 2 and 3
were obtained at the two SPR-flanking markers D2S2110 and D2S1394
and seven SNP markers around the SPR gene. We found the previously
reported promoter SNP rs1876487 also significantly associated with
age of onset in our sib pair families (p-value 0.02). One strong
linkage disequilibrium (LD) block of 45 kb including the entire SPR
gene was observed. Within this LD block all 14 inter-correlated
SNPs were significantly associated with Parkinson's disease
affection status (p-value 0.004).Conclusions: DNA polymorphisms in
a highly intercorrelated LD block, which includes the SPR gene,
appear to be associated with both sporadic and familial Parkinson's
disease. This confirms a previous study showing that SPR
potentially modulates the onset of or risk for Parkinson's disease.
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